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Conference Paper
Travis Doom, S. Ramachran, Michael Raymer, Dan Krane. ALU elements as time series genomic data. In 2006.
Travis Doom, Amanda Hanes, D. Krane, Michael Raymer. A Comparison of Codon Usage Trends in Prokaryotes. In A Comparison of Codon Usage Trends in Prokaryotes. 2009.
Dan Krane, J. Gilder, Travis Doom, Michael Raymer, S. Ford. Differences in electropherogram peak heights reported by different versions of the Genescan(R) software. In 2003.
Dan Krane, Travis Doom, G. Cooper, N. Futamura, Michael Raymer. Indexing genomic databases. In 2004.
Dan Krane, D. Raiford, E. Heizer, Michael Raymer. An Investigation of Codon Usage Bias Including Visualization and Quantification in Organisms Exhibiting Multiple Biases. In 2006.
D. Raiford, Dan Krane, Travis Doom, Michael Raymer. Isolation and visualization of codon usage biases. In 2006.
Dan Krane, Travis Doom, Michael Raymer, D. Raiford. A multi-objective genetic algorithm that employs a hybrid approach for isolating codon usage bias indicative of translational efficiency. In 2007.
Michael Raymer, Travis Doom, Dan Krane. NSF workshop on incorporating genomics into the undergraduate curriculum II. In 2003.
Dan Krane, Travis Doom, Michael Raymer, O. Garcia. A Proposed Undergraduate Bioinformatics Curriculum for Computer Scientists. In 2002.
Dan Krane, Travis Doom, Michael Raymer. SF workshop on incorporating genomics into the undergraduate curriculum. In 2002.
Journal Article
E. Heizer, D. Raiford, Michael Raymer, Travis Doom, R. Miller, Dan Krane. Amino Acid Cost and Codon Usage Biases in Six Prokaryotic Genomes: A Whole Genome Analysis. 2006 ;.
Michael Raymer, Dan Krane, D. Paoletti, Travis Doom. Assesing the implications for close relatives in the event of similar but non-matching DNA profiles. 2006 ;.
D. Raiford, Doug Raiford, D. Krane, Dan Krane, Travis Doom, Michael Raymer. Automated Isolation of Translational Efficiency Bias that Resists the Confounding Effect of GC(AT)-Content. 2008 ;.
Travis Doom, D. Krane, Doug Raiford, Michael Raymer. Automated Isolation of Translational Efficiency Bias that Resists the Confounding Effect of GC(AT)-Content. IEEE Control Systems Society. 2009 ;.  (4.46 MB)
D. Raiford, Doug Raiford, D. Krane, Dan Krane, Travis Doom, Michael Raymer. Automated Isolation of Translational Efficiency Bias that Resists the Confounding Effect of GC(AT)-Content. 2008 ;.
Dan Krane, Travis Doom, Michael Raymer. Bioinformatics: Where Biology meets Computer Science. 2004 ;.
Dan Krane, Travis Doom, L. Mueller, Michael Raymer, W. Shields, William Thompson. Commentary on: Budowle B, Shea B, Niezgoda S, Chakraborty r. CODIS STR loci data from 41 sample populations. J Forensic Sci 2001;46:453-489. Journal of Forensic Science. ASTM International; 2004 ;49(6):1388-1389.
Dan Krane, Travis Doom, Michael Raymer, O. Garcia. Crossing the interdisciplinary barrier: A baccalaureate computer science option in bioinformatics. 2003 ;.
Dan Krane, R. Miller, Michael Raymer, D. Raiford, E. Heizer, H. Akashi. Do Amino Acid Biosynthetic Costs Constrain Protein Evolution in Saccharomyces Cerevisiae?. 2008 ;.
C. Krane, Dan Krane, Michael Raymer, Travis Doom, D. Paoletti. Empirical Analysis of the STR profiles resulting from conceptual mixtures. 2005 ;.
Travis Doom, S. Ford, Dan Krane, W. Thompson, Michael Raymer. Evaluating forensic DNA evidence: Breaking open the black box (how to review electronic data). 2003 ;.
W. Thompson, Michael Raymer, Dan Krane, Travis Doom, S. Ford. Evaluating forensic DNA evidence: Essential elements of a competent defense review. 2003 ;.
D. Raiford, Doug Raiford, Dan Krane, Travis Doom, Michael Raymer. A Genetic Optimization Approach for Isolating Translational Efficiency Bias. IEEE Control Systems Society. 2008 ;.
Douglas Raiford, Dan Krane, Travis Doom, Michael Raymer. A Genetic Optimization Approach for Isolating Translational Efficiency Bias. IEEE/ACM Transactions on Computational Biology and Bioinformatics. IEEE Computer Society Press; 2009 ;8(2):342-352.  (1.85 MB)
D. Paoletti, Michael Raymer, Travis Doom, Dan Krane. Inferring the Number of Contributors to Mixed DNA Profiles. 2008 ;.
Dan Krane, Travis Doom, Michael Raymer. An interdisciplinary undergraduate bioinformatics curriculum for biological scientists. 2003 ;.
Dan Krane, Michael Raymer, J. Gilder, K. Inman, Travis Doom. Resolution of Forensic DNA Mixtures. 2008 ;.
Dan Krane, Michael Raymer, Travis Doom, S. Ford, J. Gilder. Systematic differences in electropherogram peak heights reported by different version of the Genescan® software. 2004 ;.
Michael Raymer, S. Ford, J. Gilder, Travis Doom, Dan Krane. Systematic differences in electropherogram peak heights reported by different version of the Genescan software. Journal of Forensic Science. 2004 ;.
C. Rowl, R. V. Van Trees, M. Taylor, Michael Raymer, Dan Krane. Was the Shawnee War Chief Blue Jacket a Caucasian?. 2006 ;.