Towards (Semi-) Automatic Generation of Bio-Medical Ontologies

TitleTowards (Semi-) Automatic Generation of Bio-Medical Ontologies
Publication TypeConference Paper
Year of Publication2003
AuthorsVipul Kashyap, T. C. Rindflesch, Cartic Ramakrishnan
PublisherAMIA 2003 Annual Symposium on Biomedical and Health Informatics
Abstract

The design and construction of domain specific ontologies and taxonomies requires allocation of huge resources in terms of cost and time. These efforts are human intensive and we need to explore ways of minimizing human involvement and other resources. In the biomedical domain, we seek to leverage resources such as the UMLS1 Metathesaurus and NLP-based applications such as MetaMap2 in conjunction with statistical clustering techniques, to (partially) automate the process. This is expected to be useful to the team involved in developing MeSH and other biomedical taxonomies to identify gaps in the existing taxonomies, and to be able to quickly bootstrap taxonomy generation for new research areas in biomedical informatics.

Full Text

V. Kashyap, C. Ramakrishnan, and T.C. Rindflesch, 'Towards (Semi-) Automatic Generation of Bio-Medical Ontologies,'poster, AMIA 2003 Annual Symposium on Biomedical and Health Informatics, Washington, DC, November 8-12, 2003.
year: 2003
venue url: http://www.nrstaping.com/cds/amia/disc1/welcome.htm
venue name: AMIA 2003 Annual Symposium on Biomedical and Health Informatics
hasURL: http://knoesis.wright.edu/library/publications/amia-poster.pdf

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